The detailed information of tRNA gene sequence


Sequence ID>W09107616
Genome IDABJR01000012
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodopseudomonas palustris TIE-1 [ABJR]
Start position on genome 17385
End posion on genome 17311
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaccggtccc
tRNA gene sequence 
GGGCGCATAGCTCAGCGGGAGAGCGTTCCCTTCACACGGGAGAGGTCCAAGGTTCGATCC
CTTGTGCGCCCACCA
Downstream region at tRNA end position 
ttttcccgaa
Secondary structure (Cloverleaf model)
>W09107616	Val	CAC
                   c      ACCA ttttcccgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          C T
                    T     G T T C C     A
        G A        A      | | | | |     G
      C     C T C G       C A A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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