The detailed information of tRNA gene sequence


Sequence ID>WENV170831712
Genome IDMDSZ01048964
Search identical group
Phylum/Class[MDSZ] marine metagenome; seawater
Species
Start position on genome 3898
End posion on genome 3808
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnngccgcT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCTCCCTGCTAAGGAGTTACAGGAGGCAACTTC
TGTCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
cctgagactc
Secondary structure (Cloverleaf model)
>WENV170831712	Ser	GCT
                   T      GTtt cctgagactc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TACAGGAGGCAACTTCTGTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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