The detailed information of tRNA gene sequence


Sequence ID>WENV170833568
Genome IDMDSZ01082061
Search identical group
Phylum/Class[MDSZ] marine metagenome; seawater
Species
Start position on genome 465
End posion on genome 375
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acatggactt
tRNA gene sequence 
GGAAGGGAATCTGTGCCGGTGTGCTGGCTGGTCTTCAAAACCAGTGGGGGCTGTAAGACA
GTCTCAGTGGGTTCGACTCCCACTCTCTTCCgcca
Downstream region at tRNA end position 
acccctctct
Secondary structure (Cloverleaf model)
>WENV170833568	SeC(p)	TCA
                   t      gcca acccctctct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C G        T      | | | | |     G
    G       T G T C       G T G G G     C
    G       + |   |                 T T
    T       G C T G
      G T          G     TGGGGGCTGTAAGACAGTCTCA
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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