The detailed information of tRNA gene sequence


Sequence ID>W09108728
Genome IDABTO01000001
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfohalobium retbaense DSM 5692 [ABTO]
Start position on genome 195390
End posion on genome 195314
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cctttccatt
tRNA gene sequence 
GGGCGGTTAACTCAGTTGGTCAGAGTGCCATCTTCACACGGTGGAAGTCACTGGTTCAAA
TCCAGTACCGCCCACCA
Downstream region at tRNA end position 
tcctgttctt
Secondary structure (Cloverleaf model)
>W09108728	Val	CAC
                   t      ACCA tcctgttctt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C A       A C T G G     C
    G       | | | |                 T T
    G       G A G T
      T C A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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