The detailed information of tRNA gene sequence


Sequence ID>WENV170838779
Genome IDMDSZ01174365
Search identical group
Phylum/Class[MDSZ] marine metagenome; seawater
Species
Start position on genome 1301
End posion on genome 1205
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gttcgtaaac
tRNA gene sequence 
GGAGGCGTTACGTTACCCGGTGGTACGCTCGGTCTTCAAAACCGGAGAGGGGTGTTTTGA
CATTCCTGGTGGGTTCAACTCCCGCACGCTTCCGCCA
Downstream region at tRNA end position 
aaattcctct
Secondary structure (Cloverleaf model)
>WENV170838779	SeC(p)	TCA
                   c      GCCA aaattcctct
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     C G C C C     A
      C C A        A      | + | | |     A
    C       T T G C       G T G G G     C
    G         | | |                 T T
    G       T A C G
      T G G        C     AGAGGGGTGTTTTGACATTCCTG
                    T + G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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