The detailed information of tRNA gene sequence


Sequence ID>WENV170880923
Genome IDMDTC01122393
Search identical group
Phylum/Class[MDTC] marine metagenome; seawater
Species
Start position on genome 2407
End posion on genome 2316
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgtccgtta
tRNA gene sequence 
GGAGCGGTGGCCGAGCCCGGTTGAAGGCGCTTGATTCGAAATCAAGTATACCCGCAAGGG
TATCGGGGGTTCGAATCCCTCTCGCTCCGCCA
Downstream region at tRNA end position 
tacgaagcta
Secondary structure (Cloverleaf model)
>WENV170880923	Ser	CGA
                   a      GCCA tacgaagcta
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  C         G C C G       G G G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TATACCCGCAAGGGTATC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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