The detailed information of tRNA gene sequence


Sequence ID>WENV170905917
Genome IDMDTE01031359
Search identical group
Phylum/Class[MDTE] marine metagenome; seawater
Species
Start position on genome 53103
End posion on genome 53195
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattataaat
tRNA gene sequence 
GGAGGGTTCGCATAGTGGCCTAGTGCGCCCGCCTGCTAAGCGGGTTGGAGATGTAAAGTC
TTCGCGCGGGTTCGAATCCCGCACCCTCCGCCA
Downstream region at tRNA end position 
tttttttaaa
Secondary structure (Cloverleaf model)
>WENV170905917	Ser	GCT
                   t      GCCA tttttttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGAGATGTAAAGTCTTCGC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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