The detailed information of tRNA gene sequence


Sequence ID>WENV170906652
Genome IDMDTE01041525
Search identical group
Phylum/Class[MDTE] marine metagenome; seawater
Species
Start position on genome 59841
End posion on genome 59744
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
caatttttaa
tRNA gene sequence 
GGGAGTGTATAGGTAGCTGGTGCGCCTCACGGACTTCAAATCCGATGGCGGGCCCTAAAC
AGGTCCGTAGTGGGTTCGATTCCCACACGCTCCCCCCA
Downstream region at tRNA end position 
gaaaggattt
Secondary structure (Cloverleaf model)
>WENV170906652	SeC(p)	TCA
                   a      CCCA gaaaggattt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     T - A          T T
                    A     C A C C C     A
      C G A        T      | | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G C        C     TGGCGGGCCCTAAACAGGTCCGTA
                    A   A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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