The detailed information of tRNA gene sequence


Sequence ID>WENV170945299
Genome IDMDUP01005662
Search identical group
Phylum/Class[MDUP] marine metagenome; 85 m water sample from station 6
Species
Start position on genome 502
End posion on genome 428
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttcatactct
tRNA gene sequence 
GCCCCTGTAGTTCAATGGATAGAATAAATCCCTCCTAAGGATTAGATACTGGTTCGACTC
CAGTTGGGGGTACAA
Downstream region at tRNA end position 
taatttggag
Secondary structure (Cloverleaf model)
>WENV170945299	Arg	CCT
                   t      ACAA taatttggag
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G + T          T C
                    T     T G A C C     A
      T A A        A      | | | | |     G
    G       C T T G       A C T G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     AGAT
                    A - T
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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