The detailed information of tRNA gene sequence


Sequence ID>WENV170945510
Genome IDMDUP01018909
Search identical group
Phylum/Class[MDUP] marine metagenome; 85 m water sample from station 6
Species
Start position on genome 501
End posion on genome 586
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catcactcta
tRNA gene sequence 
GGAGAGATGGCTGAGAGGCTTAAAGCGGCTCCTTGCTAAGGAGTTATAGATAACATCTAT
CGAGGGTTCGAATCCTTCTCTCTCCGtta
Downstream region at tRNA end position 
gtggggattt
Secondary structure (Cloverleaf model)
>WENV170945510	Ser	GCT
                   a      Gtta gtggggattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T T C C     A
      A G A        G      | | + | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T T A        G     TATAGATAACATCTATC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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