The detailed information of tRNA gene sequence


Sequence ID>WENV170945681
Genome IDMDUP01035772
Search identical group
Phylum/Class[MDUP] marine metagenome; 85 m water sample from station 6
Species
Start position on genome 359
End posion on genome 282
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttaaggttag
tRNA gene sequence 
GCACCAGTGCCCGAGCGGCCTAAGGGAACGGTCTGCAAAGCCGTAAAGTCGCGGGTTCAA
ATCCCGCCTGGTGCTCAA
Downstream region at tRNA end position 
ttaatgtaat
Secondary structure (Cloverleaf model)
>WENV170945681	Cys	GCA
                   g      TCAA ttaatgtaat
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      C T A        A     AAAGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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