The detailed information of tRNA gene sequence


Sequence ID>WENV170946148
Genome IDMDUQ01025525
Search identical group
Phylum/Class[MDUQ] marine metagenome; 100 m water sample from station 6
Species
Start position on genome 460
End posion on genome 549
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ataatttcac
tRNA gene sequence 
GGAGAGGTGGCAGAGCTAGGTTTATTGTGACGGTCTCGAAAACCGTTGTACCGAAAGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
atnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170946148	Ser	CGA
                   c      GCCA atnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  A         G A C G       G T G G G     C
  G         + | | +                 T T
  G         T T G T
    T T T A        G     TGTACCGAAAGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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