The detailed information of tRNA gene sequence


Sequence ID>WENV170954434
Genome IDMJUG01008780
Search identical group
Phylum/Class[MJUG] soil metagenome; viral particles from soil sample MS1
Species
Start position on genome 542
End posion on genome 455
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taagtaacac
tRNA gene sequence 
GGACGGTTGGCAGAGCGGCTTATTGCACTTGCCTGCTAAGCAAGTGGGGTGCTTGCACCT
CCGTGGGTTCAAATCCTACACCGTCCGCtg
Downstream region at tRNA end position 
ttggcccgcc
Secondary structure (Cloverleaf model)
>WENV170954434	Ser	GCT
                   c      GCtg ttggcccgcc
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     C A T C C     A
      C G A        G      | | + | |     A
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    C       T T G C
      T T A        A     TGGGGTGCTTGCACCTCC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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