The detailed information of tRNA gene sequence


Sequence ID>WENV170955817
Genome IDMJUK01022448
Search identical group
Phylum/Class[MJUK] soil metagenome; viral particles from soil sample TG5
Species
Start position on genome 295
End posion on genome 393
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taatttctac
tRNA gene sequence 
GGAGGCGAATCTGTTCTGGTGAGCGGCGCGGTCTTCAAAACCGCTTGTGAGATTGTGAGA
GCAGTCTTAGGTAGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
atttgatttt
Secondary structure (Cloverleaf model)
>WENV170955817	SeC(p)	TCA
                   c      GCCA atttgatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     C A C C C     A
      T C T        T      | |   | |     G
    G       T G T C       G T A G G     C
    G       + | + |                 T T
    T       G C G G
      G A          C     TTGTGAGATTGTGAGAGCAGTCTTAG
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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