The detailed information of tRNA gene sequence


Sequence ID>WENV170956170
Genome IDMJUN01000187
Search identical group
Phylum/Class[MJUN] soil metagenome; viral particles from soil sample TG1
Species
Start position on genome 625
End posion on genome 527
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttaatcacac
tRNA gene sequence 
GGAGGCGAATCTGTTCTGGTGAGCGGCGCGGTCTTCAAAACCGTCTGTGAGATTGTGAGA
GCAATCTTAGGTAGGTTCGATTCCTACACGCCTCCGCCA
Downstream region at tRNA end position 
aaattaggga
Secondary structure (Cloverleaf model)
>WENV170956170	SeC(p)	TCA
                   c      GCCA aaattaggga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     C A T C C     A
      T C T        T      | | | | |     G
    G       T G T C       G T A G G     C
    G       + | + |                 T T
    T       G C G G
      G A          C     CTGTGAGATTGTGAGAGCAATCTTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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