The detailed information of tRNA gene sequence


Sequence ID>WENV170956317
Genome IDMJUN01021081
Search identical group
Phylum/Class[MJUN] soil metagenome; viral particles from soil sample TG1
Species
Start position on genome 613
End posion on genome 703
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcaacaacct
tRNA gene sequence 
GGAGAGGTACCCAAGTGGCTGAAGGGGCGGGATTGCTAATCCTGTAGGTCGGAGTAATCC
GGCGCGAGAGTTCGAATCTCTCTCTCTCCGCag
Downstream region at tRNA end position 
acagtcgaca
Secondary structure (Cloverleaf model)
>WENV170956317	Ser	GCT
                   t      GCag acagtcgaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C T C     A
      T G A        A      | | | | |     G
    G       A C C C       G A G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGTCGGAGTAATCCGGCGC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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