The detailed information of tRNA gene sequence


Sequence ID>WENV170957148
Genome IDMJUQ01016951
Search identical group
Phylum/Class[MJUQ] soil metagenome; viral particles from soil sample PT1
Species
Start position on genome 183
End posion on genome 85
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgtctgaagt
tRNA gene sequence 
GGAGGCGCATCTGTTCTGGTGAATGGCGCGGTCTTCAAAACCGTCTGTGAGTTTGTGAGA
ACAAACTTGGGTAGGTTCGATTCCTACACGCCTCCGCCA
Downstream region at tRNA end position 
atttgattta
Secondary structure (Cloverleaf model)
>WENV170957148	SeC(p)	TCA
                   t      GCCA atttgattta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T T
                    A     C A T C C     A
      T C T        T      | | | | |     G
    G       T G T C       G T A G G     C
    G       | + + |                 T T
    T       A T G G
      G A          C     CTGTGAGTTTGTGAGAACAAACTTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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