The detailed information of tRNA gene sequence


Sequence ID>WENV170962878
Genome IDMRWF01029236
Search identical group
Phylum/Class[MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
Species
Start position on genome 220979
End posion on genome 221068
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caagtaccgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTGAACGGGACGGTCTCGAAAACCGTTGTGCGGGTAACCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tatctatcct
Secondary structure (Cloverleaf model)
>WENV170962878	Ser	CGA
                   c      GCCA tatctatcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGCGGGTAACCGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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