The detailed information of tRNA gene sequence


Sequence ID>WENV170964985
Genome IDMTET01000176
Search identical group
Phylum/Class[MTET] soil metagenome; garden soil control
Species
Start position on genome 59959
End posion on genome 60054
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atcaatatct
tRNA gene sequence 
GGAAGGGATGCATGCCCGGTGGCATGTCCGGACTTCAAATCCGGGAGGGGCCGATAGACG
GTCTTTGGTGGGTTCGACTCCCATTCTCTTCCGCCA
Downstream region at tRNA end position 
ttcggctttt
Secondary structure (Cloverleaf model)
>WENV170964985	SeC(p)	TCA
                   t      GCCA ttcggctttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T C
                    T     T A C C C     A
      C C C        G      + | | | |     G
    G       G T A C       G T G G G     C
    G       | | | |                 T T
    T       C A T G
      G G          T     GAGGGGCCGATAGACGGTCTTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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