The detailed information of tRNA gene sequence


Sequence ID>WENV170966023
Genome IDMTEV01011928
Search identical group
Phylum/Class[MTEV] soil metagenome; soil bioaugmentation with soil previously exposed to atrazine
Species
Start position on genome 235821
End posion on genome 235726
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atcaatatct
tRNA gene sequence 
GGAAGGGATGCATGCCCGGTGGCATGTCCGGACTTCAAATCCGGGAGGGGCCGATAGACG
GTCTTTGGTGGGTTCGACTCCCATTCTCTTCCGCCA
Downstream region at tRNA end position 
ttcggctttt
Secondary structure (Cloverleaf model)
>WENV170966023	SeC(p)	TCA
                   t      GCCA ttcggctttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T C
                    T     T A C C C     A
      C C C        G      + | | | |     G
    G       G T A C       G T G G G     C
    G       | | | |                 T T
    T       C A T G
      G G          T     GAGGGGCCGATAGACGGTCTTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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