The detailed information of tRNA gene sequence


Sequence ID>WENV170966948
Genome IDMTKW01000005
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 20892
End posion on genome 20805
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cactcccaac
tRNA gene sequence 
GGTGAGGTGGGTGAGTGGCTGAAACCATCAGTTTGCTAAACTGACGTACGGGTGACCGTA
TCGGGGGTTCGAATCCCCCTCTCACCGCac
Downstream region at tRNA end position 
aacaaaaaac
Secondary structure (Cloverleaf model)
>WENV170966948	Ser	GCT
                   c      GCac aacaaaaaac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGTGACCGTATC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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