The detailed information of tRNA gene sequence


Sequence ID>WENV170966993
Genome IDMTKW01000061
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 54750
End posion on genome 54655
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttgttgccac
tRNA gene sequence 
GGGGGTAGTTGGCGGTCTGGTGACGCTCATGGACTTCAAATCCAGTGGTGGGCGCGATCC
GTCCACGGTGGGTTCGATTCCCATCTACTCCCGCCA
Downstream region at tRNA end position 
aaaaattagc
Secondary structure (Cloverleaf model)
>WENV170966993	SeC(p)	TCA
                   c      GCCA aaaaattagc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    T     T A C C C     A
      C T G        T      + | | | |     G
    T       G C G G       G T G G G     C
    G       | | | +                 T T
    G       C G C T
      T G A        C     TGGTGGGCGCGATCCGTCCACG
                    A   G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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