The detailed information of tRNA gene sequence


Sequence ID>WENV170966996
Genome IDMTKW01000063
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 42045
End posion on genome 41970
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actaacagaa
tRNA gene sequence 
AGGGGAGTAGCTCAACGGGAAGAGCAACGGTCTCCAAAACCGTAGGCTGCGGGTTCGAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
gtaaaaccgc
Secondary structure (Cloverleaf model)
>WENV170966996	Trp	CCA
                   a      GCCA gtaaaaccgc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     AGGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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