The detailed information of tRNA gene sequence


Sequence ID>WENV170967085
Genome IDMTKW01000206
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2152
End posion on genome 2248
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cttcttgtgc
tRNA gene sequence 
GGGAGTAGATTGGTCCTGGTGGGCCTCCTGGACTTCAAATCCAGTGGCGGGCAGCTAACC
TGGCCGCGGTGGGTTCGATTCCCACGTACTCCCGCCA
Downstream region at tRNA end position 
tttttatgcc
Secondary structure (Cloverleaf model)
>WENV170967085	SeC(p)	TCA
                   c      GCCA tttttatgcc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G   G          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       T G G T       G T G G G     C
    G       + | |                   T T
    T       G C C T
      G G          C     TGGCGGGCAGCTAACCTGGCCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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