The detailed information of tRNA gene sequence


Sequence ID>WENV170967156
Genome IDMTKW01000394
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 40990
End posion on genome 40914
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgagcggacc
tRNA gene sequence 
GGGCCCGTAGCTTAGCCAGGTTGAGCGCACGGCTGATAACCGTGAGGTCACGCGTTCAAA
TCGCGTCGGGCCCATCA
Downstream region at tRNA end position 
actcttccta
Secondary structure (Cloverleaf model)
>WENV170967156	Ile	GAT
                   c      ATCA actcttccta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      C G A        A      | | | | |     A
    C       T T C G       A C G C G     C
    A       + | | |                 T T
    G       G A G C
      G T T        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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