The detailed information of tRNA gene sequence


Sequence ID>WENV170967164
Genome IDMTKW01000424
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 107973
End posion on genome 108060
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttagcttt
tRNA gene sequence 
GGAAGTGTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCCGTACGGGTGACCGTA
CCGGGGGTTCGAATCCCCCCGCTTCCGCgg
Downstream region at tRNA end position 
agcaaaagtg
Secondary structure (Cloverleaf model)
>WENV170967164	Ser	GCT
                   t      GCgg agcaaaagtg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGTGACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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