The detailed information of tRNA gene sequence


Sequence ID>WENV170967241
Genome IDMTKW01000567
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 113641
End posion on genome 113726
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcttaggct
tRNA gene sequence 
GTCGAGGTCGCCTAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTTCCGCTCCGCGGATC
GTGGGTTCAAATCCCACCCTCGGCGCtt
Downstream region at tRNA end position 
tcttacaggg
Secondary structure (Cloverleaf model)
>WENV170967241	Ser	GCT
                   t      GCtt tcttacaggg
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G T G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TTCCGCTCCGCGGATC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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