The detailed information of tRNA gene sequence


Sequence ID>WENV170967378
Genome IDMTKW01001133
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9619
End posion on genome 9543
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caattcacac
tRNA gene sequence 
CGCGGGGTAGAGCAGCTAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
tacggtccca
Secondary structure (Cloverleaf model)
>WENV170967378	Met	CAT
                   c      ACCA tacggtccca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    T       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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