The detailed information of tRNA gene sequence


Sequence ID>WENV170967392
Genome IDMTKW01001221
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5125
End posion on genome 5036
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcacagcat
tRNA gene sequence 
GGAGAGGTGACAGAGCGGCCGAATGTGGCGGTCTCGAAAACCGTTGGGCGCGTGAGCGTC
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtcttttatc
Secondary structure (Cloverleaf model)
>WENV170967392	Ser	CGA
                   t      GCCA gtcttttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A C A       G T G G G     C
    G         | | |                 T T
    C       A T G T
      C G A        G     TGGGCGCGTGAGCGTCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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