The detailed information of tRNA gene sequence


Sequence ID>WENV170967408
Genome IDMTKW01001264
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 38380
End posion on genome 38306
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaattatttt
tRNA gene sequence 
GGCCCGTTCGTCTAGGGGTTAGGACGTCAGGTTTTCATCCTGGTAACAGGGGTTCGATTC
CCCTACGGGCTGCAA
Downstream region at tRNA end position 
cgtcttattt
Secondary structure (Cloverleaf model)
>WENV170967408	Glu	TTC
                   t      GCAA cgtcttattt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAAC
                    T + G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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