The detailed information of tRNA gene sequence


Sequence ID>WENV170967429
Genome IDMTKW01001387
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8738
End posion on genome 8663
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttacttatct
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGCAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGAGTTCGACT
CTCCTCATCTCCACCA
Downstream region at tRNA end position 
ttttttatgt
Secondary structure (Cloverleaf model)
>WENV170967429	Ala	TGC
                   t      ACCA ttttttatgt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T C
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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