The detailed information of tRNA gene sequence


Sequence ID>WENV170967448
Genome IDMTKW01001422
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 20033
End posion on genome 20107
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattcctttc
tRNA gene sequence 
GGGCCTGTAGCTTAGTCCGGTTAGAGCGCTCGGCTCATAACCGAGTGGCCGCCGGTTCAA
ATCCGGCCAGGCCCAtgc
Downstream region at tRNA end position 
tggctactga
Secondary structure (Cloverleaf model)
>WENV170967448	Met	CAT
                   c      Atgc tggctactga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G G C C     A
    C T G A        A      | | | | |     A
  C         T T C G       G C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     TGGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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