The detailed information of tRNA gene sequence


Sequence ID>WENV170967518
Genome IDMTKW01001778
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4504
End posion on genome 4411
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaggcagcac
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTGAAGGCGGTCGCCTGCTAAGCGATTAAGTGGGTAAAAACC
TGCTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
catgcgcccg
Secondary structure (Cloverleaf model)
>WENV170967518	Ser	GCT
                   c      GCCA catgcgcccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAAGTGGGTAAAAACCTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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