The detailed information of tRNA gene sequence


Sequence ID>WENV170967527
Genome IDMTKW01001852
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1925
End posion on genome 1838
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aataaaatat
tRNA gene sequence 
GGAGAGATGTCCGAGAGGTCGAAGGTGGCAGTCTCGAAAACTGCTGCACCGCAAGGTGCC
GGGAGTTCGAATCTCCCTCTCTCCGCCA
Downstream region at tRNA end position 
tgagcctgtt
Secondary structure (Cloverleaf model)
>WENV170967527	Ser	CGA
                   t      GCCA tgagcctgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      A G A        G      | | | | |     G
    G       G C C T       G G G A G     C
    G         | |                   T T
    T       A G G T
      C G A        G     TGCACCGCAAGGTGCC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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