The detailed information of tRNA gene sequence


Sequence ID>WENV170967636
Genome IDMTKW01002544
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 16014
End posion on genome 16090
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggaaaatcgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
aactgcaaca
Secondary structure (Cloverleaf model)
>WENV170967636	Met	CAT
                   t      ACCA aactgcaaca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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