The detailed information of tRNA gene sequence


Sequence ID>WENV170967644
Genome IDMTKW01002623
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6783
End posion on genome 6872
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccacaagac
tRNA gene sequence 
GGAGAGATGGCGGAGTGGTTGAACGCGCCGGTCTTGAAAACCGGATTCCGCGCAAGCGGA
ACGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tccccctcca
Secondary structure (Cloverleaf model)
>WENV170967644	Ser	TGA
                   c      GCCA tccccctcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C G       G G G G G     C
    G         | | |                 T T
    T       A C G C
      T G A        G     ATTCCGCGCAAGCGGAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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