The detailed information of tRNA gene sequence


Sequence ID>WENV170967694
Genome IDMTKW01002910
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 579
End posion on genome 667
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggaatatag
tRNA gene sequence 
GGAAGAGTGCTGGAGTTTGGTTGAACAGGCAGACCTGGAAAGTCTGTGTACCTGAAAGGT
GCCGTGGGTTCAAATCCCACCTCTTCCGCtt
Downstream region at tRNA end position 
tgatttaaag
Secondary structure (Cloverleaf model)
>WENV170967694	Ser	GGA
                   g      GCtt tgatttaaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     A
  T         G G T C       G T G G G     C
  G           | | |                 T T
  G         A C A G
    T T G A        G     TGTACCTGAAAGGTGCC
                    C - G
                    A - T
                    G - C
                    A - T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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