The detailed information of tRNA gene sequence


Sequence ID>WENV170967710
Genome IDMTKW01002940
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1872
End posion on genome 1946
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aataaggtta
tRNA gene sequence 
AGGGGTATAGTTCAGTGGTAGAACGTCGGTCTCCAAAACCGAATGTCGTGGGTTCAAATC
CTGCTACCCCTGCCA
Downstream region at tRNA end position 
atatggacct
Secondary structure (Cloverleaf model)
>WENV170967710	Trp	CCA
                   a      GCCA atatggacct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G T C C     A
        G A        A      | + + | |     A
      T     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     ATGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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