The detailed information of tRNA gene sequence


Sequence ID>WENV170967718
Genome IDMTKW01003041
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10965
End posion on genome 10869
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aacctgtttc
tRNA gene sequence 
GGGAGTAGATAGGTTCTGGTGTGCCTTCCGGACTTCAAATCCGGCAACGCGCTCTAATAA
AGCGCGTGGTGGGTTCGATTCCCACATACTCCCGCCA
Downstream region at tRNA end position 
attgaccttt
Secondary structure (Cloverleaf model)
>WENV170967718	SeC(p)	TCA
                   c      GCCA attgaccttt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G T          T     CAACGCGCTCTAATAAAGCGCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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