The detailed information of tRNA gene sequence


Sequence ID>WENV170967819
Genome IDMTKW01003642
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 23250
End posion on genome 23339
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctacattttc
tRNA gene sequence 
GGAAAGGTGCCAGAGCGGTCGAATGGGGCGGTCTCGAAAACCGTTGTGCGGGCAACTGTA
CCGAGGGTTCGAATCCCTCCCTTTCCGCAA
Downstream region at tRNA end position 
atcgtagcaa
Secondary structure (Cloverleaf model)
>WENV170967819	Ser	CGA
                   c      GCAA atcgtagcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTGCGGGCAACTGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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