The detailed information of tRNA gene sequence


Sequence ID>WENV170967873
Genome IDMTKW01004025
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8195
End posion on genome 8120
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaattttcgc
tRNA gene sequence 
TTCGGCGTAGTTCAAACGGAAGAACACCGGACTCCAAATCCGGGAGATGCGGGTTCGAAT
CCCGCCGCCGAAGCCA
Downstream region at tRNA end position 
cgccgacgta
Secondary structure (Cloverleaf model)
>WENV170967873	Trp	CCA
                   c      GCCA cgccgacgta
                     T - A
                     T - A
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      A A A        A      | | | | |     G
    C       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      A A          A     GAGAT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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