The detailed information of tRNA gene sequence


Sequence ID>WENV170967933
Genome IDMTKW01004494
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 19451
End posion on genome 19543
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtaatgacg
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCGAAGGCGGTCGACTCGAAATCGACTAGGCGGTGATGAGCC
GTCTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttaagaaat
Secondary structure (Cloverleaf model)
>WENV170967933	Ser	CGA
                   g      GCCA tttaagaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGTGATGAGCCGTCTC
                    G - C
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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