The detailed information of tRNA gene sequence


Sequence ID>WENV170967944
Genome IDMTKW01004528
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 21718
End posion on genome 21810
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgctcaacat
tRNA gene sequence 
GGAGGGTTGTCCGAGCTGGCTGAAGGAGCGCGACTGGAAATCGCGTGTGCCCCTACAAGG
GTACCGAGAGTTCGAATCTCTTGCCCTCCGCCA
Downstream region at tRNA end position 
caatttgtcc
Secondary structure (Cloverleaf model)
>WENV170967944	Ser	GGA
                   t      GCCA caatttgtcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     T T C T C     A
    T C G A        G      + | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTGCCCCTACAAGGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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