The detailed information of tRNA gene sequence


Sequence ID>WENV170967994
Genome IDMTKW01005070
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 352
End posion on genome 427
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaggtttgc
tRNA gene sequence 
AGGCCCGTAGCTCCAACGGCAGAGCAGCGGTCTCCAAAACCGACGGTTGGGGGTTCGAAT
CCCTCCGGGCCTGCCA
Downstream region at tRNA end position 
caaattttca
Secondary structure (Cloverleaf model)
>WENV170967994	Trp	CCA
                   c      GCCA caaattttca
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A A C        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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