The detailed information of tRNA gene sequence


Sequence ID>WENV170968059
Genome IDMTKW01005829
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 152
End posion on genome 60
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgctcaatgt
tRNA gene sequence 
GGAGGGTTGTCCGAGCTGGCTGAAGGAGCGCGACTGGAAATCGCGTGTGCCCCTACAAGG
GTACCGAGAGTTCGAATCTCTTGCCCTCCGCCA
Downstream region at tRNA end position 
atattgaaaa
Secondary structure (Cloverleaf model)
>WENV170968059	Ser	GGA
                   t      GCCA atattgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     T T C T C     A
    T C G A        G      + | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTGCCCCTACAAGGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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