The detailed information of tRNA gene sequence


Sequence ID>WENV170968080
Genome IDMTKW01006009
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 41745
End posion on genome 41821
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacgtagtgg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTTGTCGGTTCGAA
TCCGGCCCCCGCAACCA
Downstream region at tRNA end position 
attttgatga
Secondary structure (Cloverleaf model)
>WENV170968080	Met	CAT
                   g      ACCA attttgatga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | + | | |     G
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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