The detailed information of tRNA gene sequence


Sequence ID>WENV170968085
Genome IDMTKW01006050
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 815
End posion on genome 739
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggcgcaaggt
tRNA gene sequence 
CGAGGTGTAGCGCAGTTTGGTAGCGCGCTTGGTTCGGGACCAAGAGGCCCCGGGTTCAAA
TCCCGGCACCTCGACCA
Downstream region at tRNA end position 
ttcttatgcc
Secondary structure (Cloverleaf model)
>WENV170968085	Pro	CGG
                   t      ACCA ttcttatgcc
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    T       C G C G       C C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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