The detailed information of tRNA gene sequence


Sequence ID>WENV170968105
Genome IDMTKW01006156
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3004
End posion on genome 3098
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatagaaggc
tRNA gene sequence 
GGAGAGATGGCCGAGTCCGGTTGAAGGCGCTCGACTCGAAATCGAGTAGGGGGTGTTGAG
CCTCCTCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tannnnnnnn
Secondary structure (Cloverleaf model)
>WENV170968105	Ser	CGA
                   c      GCCA tannnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAGGGGGTGTTGAGCCTCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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