The detailed information of tRNA gene sequence


Sequence ID>WENV170968141
Genome IDMTKW01006746
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 385
End posion on genome 472
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gacgccacgg
tRNA gene sequence 
GGAAGGGTGTCCGAGCCGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTCGTAAGAGCC
GTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
ttactgcgcg
Secondary structure (Cloverleaf model)
>WENV170968141	Ser	TGA
                   g      GCCA ttactgcgcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     G
  G         G C C T       G T G G G     C
  G           | | |                 T T
  T         A G G A
    T T A          G     TGACTCGTAAGAGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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