The detailed information of tRNA gene sequence


Sequence ID>WENV170968142
Genome IDMTKW01006746
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 500
End posion on genome 593
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agctaaatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTAGGTCGAAGGCGGTCGCCTGCTAAGCGATTGTACAGCCTAAAAC
TGTACCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
taaaaaatac
Secondary structure (Cloverleaf model)
>WENV170968142	Ser	GCT
                   c      GCCA taaaaaatac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       C C G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TGTACAGCCTAAAACTGTACC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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